Oceanologia No. 51 (4) / 09

Arakawa A., Lamb V. R., 1981, A potential enstrophy and energy conserving scheme for the shallow water equations, Mon. Weather Rev., 109 (1), 18–36. http://dx.doi.org/10.1175/1520-0493(1981)109<0018:APEAEC>2.0.CO;2

Arbic B. K., Garner S. T., Hallberg R. W., Simmons H. L., 2004, The accuracy of surface elevations in forward global barotropic and baroclinic tide models, Deep_Sea Res. Pt. II, 51 (25–26), 3069–3101.

Arneborg L., 2000, Oceanographic studies of internal waves and diapycnal mixing, Ph. D. thesis A59, Earth Sci. Cent., Univ. Gothenburg, Sweden.

Arneborg L., 2002, Mixing efficiencies in patchy turbulence, J. Phys. Oceaogr., 32 (5), 1496–1506. http://dx.doi.org/10.1175/1520-0485(2002)032<1496:MEIPT>2.0.CO;2

Axell L. B., 1998, On the variability of Baltic Sea deepwater mixing, J. Geophys. Res., 103 (C10), 21 667–21 682.

Berntsen J., Xing J., Davies A. M., 2008, Numerical studies of internal waves at a sill: Sensitivity to horizontal grid size and subgrid scale closure, Cont.Shelf Res., 28 (10–11), 1376–1393.

Döös K., Nycander J., Sigray P., 2004, Slope-dependent friction in a barotropic model, J. Geophys. Res., 109 (C01008), http://dx.doi.org/10.1029/2002JC001517

Dyer K. R., 1986, Coastal and estuarine sediment dynamics, Joh Wiley & Sons Ltd., Chichester, 358 pp., http://dx.doi.org/10.1029/2002JC001517

Egbert G. D., Ray R. D., Bills B. G., 2004, Numerical modeling of the global semidiurnal tide in the present day and in the last glacial maximum, J. Geophys. Res., 109 (C03003), http://dx.doi.org/10.1029/2003JC001973

Flather R. A., 1976, A tidal model of the northwest European continental shelf, Mem. Soc. Roy. Sci. Liege, Ser. 6th, Vol. 10, 141–160.

Gustafsson B. G., Andersson H. C., 2001, Modeling the exchange of the Baltic Sea from the meridional atmospheric pressure difference across the North Sea, J. Geophys. Res., 106 (C9), 19731–19744. http://dx.doi.org/10.1029/2000JC000593

Gustafsson K. E., 2001, Computations of the energy flux to mixing processes via baroclinic wave drag on barotropic tides, Deep-Sea Res. Pt. I, 48 (10), 2283–2295. http://dx.doi.org/10.1016/S0967-0637(01)00008-5

Jakobsen F., Azam M. H., Mahboob-Ul-Kabir M., 2002, Residual flow in the Meghna Estuary on the coastline of Bangladesh, Estuar. Coast. Shelf Sci., 55 (4), 587–597, http://dx.doi.org/10.1006/ecss.2001.0929

Jayne S. R., St.Laurent L. C., 2001, Parameterizing tidal dissipation over rough topography, Geophys. Res. Lett., 28 (5), 81-814, http://dx.doi.org/10.1029/2000GL012044

Johnsson M., Green J. A. M., Stigebrandt A., 2007, Baroclinic wave drag from two closely spaced sills in a narrow fjord as inferred from basin water mixing, J. Geophys. Res., 112 (C11002), http://dx.doi.org/10.1029/2006JC003694

Kuzmina N., Rudels B., Stipa T., Zhurbas V., 2005, The structure and driving mechanisms of the Baltic intrusions, J.Phys.Oceanogr., 35 (6), 1120–1137.

Liljebladh B., Stigebrandt A., 2000, The contribution of the surface layer via internal waves to the energetics of deepwater mixing in the baltic, Paper III, Ph. D. thesis A56, Earth Sci. Cent., Univ. Gothenburg, Sweden.

Martinsen E. A., Engedahl H., 1987, Implementation and testing of a lateral boundary scheme as an open boundary-condition in a barotropic ocean model, Coast. Eng., 11 (5–6), 603–627.

Meier H. E. M., 2005, Modeling the age of Baltic Sea water masses: Quantification and steady state sensitivity experiments, J. Geophys. Res., 110 (C02006), 1–14.

Meier H. E. M., Feistel R., Piechura J., Arneborg L., Burchard H., Fiekas V., Golenko N., Kuzmina N., Mohrholz V., Nohr C., Paka V. T., Sellschopp J., Stips A., Zhurbas V., 2006, Ventilation of the Baltic Sea deep water: a brief review of present knowledge from observations and models, Oceanologia, 48 (S), 133–164.

Merrifield M.A., Holloway P.E., 2002, Model estimates of M2 internal tide energetics at the Hawaiian Ridge, J. Geophys. Res., 107 (C8), http://dx.doi.org/10.1029/2001JC000996

Niwa Y., Hibiya T., 2001, Numerical study of the spatial distribution of the M 2 internal tide in the Pacific Ocean, J. Geophys. Res., 106(C10), 22441–22449.

Nycander J., 2005, Generation of internal waves in the deep ocean by tides, J. Geophys. Res., 110 (C10028), http://dx.doi.org/10.1029/2004JC002607.

Osborn T., 1980, Estimates of the local rate of vertical diffusion from dissipation measurements, J. Phys. Oceanogr., 10 (1), 83–89. http://dx.doi.org/10.1175/1520-0485(1980)010<0083:EOTLRO>2.0.CO;2

Press W. H., Teukolsky S.A., Vetterli g W.T., Flannery B.P., 1997, Numerical recipes, 2nd edn., Cambridge Univ. Press, Cambridge, 963 pp.

Samuelsson M., Stigebrandt A., 1996, Main characteristics of the long-term sea level variability in the Baltic Sea, Tellus A, 48 (5), 672-683, http://dx.doi.org/10.1034/j.1600-0870.1996.t01-4-00006.x

Seifert T., Tauber F., Kayser B., 2001, A high resolution spherical grid topography of the Baltic Sea – revised edition, Proc.Baltic Sea Sci.Cong., 25–29 Nov. 2001, Stockholm, poster No 147.

Simmons H. L., Hallberg R. W., Arbic B. K., 2004, Internal wave generation in a global baroclinic tide model, Deep-Sea Res. Pt. II, 51 (25–26), 3043–3068.

Sjoberg B., Stigebrandt A., 1992, Computations of the geographical distribution of the energy flux to mixing processes via internal tides and the associated vertical circulationintheocean, Deep-Sea Res., 39 (2A), 269–291, http://dx.doi.org/10.1016/0198-0149(92)90109-7

Smith S. D., 1980, Wind stress and heat flux over the ocean in gale force winds J. Phys. Oceanogr., 10 (5), 709–726, http://dx.doi.org/10.1175/1520-0485(1980)010<0709:WSAHFO>2.0.CO;2

Soulsby R., 1997, Dynamics of marine sands – A manual for practical applications, Thomas Telford, London, 249 pp.

St. Laurent L., Stringer S., Garrett C., Perrault-Joncas D., 2003, The generation of internal tides at abrupt topography, Deep-Sea Res.Pt. I, 50 (8), 987–1003, http://dx.doi.org/10.1016/S0967-0637(03)00096-7

Stacey M. W., 1984, The interaction of tides with the sill of a tidally energetic inlet, J. Phys. Oceanogr., 14 (6), 1105–1117. http://dx.doi.org/10.1175/1520-0485(1984)014<1105:TIOTWT>2.0.CO;2

Stigebrandt A., 1976, Vertical diffusion driven by internal waves in a sill fjord, J. Phys. Oceanogr., 6(4), 486–495, http://dx.doi.org/10.1175/1520-0485(1976)006<0486:VDDBIW>2.0.CO;2

Stigebrandt A., 1980a, Barotropic and baroclinic response of a semi-enclosed basin to barotropic forcing from the sea, [in:] Fjord oceanography, H. J. Freeland, D. M. Farmer & C. D. Levings (eds.), Plenum, New York, 151–164.

Stigebrandt A., 1980b, Some aspects of tidal interactions with fjord constrictions, Estuar. Coast. Mar. Sci., 11 (2), 151-166, http://dx.doi.org/10.1016/S0302-3524(80)80038-7

Stigebrandt A., 1999, Resistance to barotropic tidal ?ow in straits by baroclinic wave drag, J. Phys. Oceanogr., 29 (2), 191-197, http://dx.doi.org/10.1175/1520-0485(1999)029<0191:RTBTFI>2.0.CO;2

Stigebrandt A., 2001, Physical oceanography of the Baltic Sea, [in:] Asystems analysis of the Baltic Sea F. Wulff, L. Rahm & P.Larsso (eds.), Springer Verlag, Heidelberg, 19–74.

Stigebrandt A., 2003, Regulation of vertical stratification, length of stagnation periods and oxygen conditions in the deeper deepwater of the Baltic proper, Meereswiss.Ber., 54, 69–80.

Stigebrandt A., Aure J., 1989, Vertical mixing in basin waters of fjords, J. Phys. Oceanogr., 19 (7), 917–926, http://dx.doi.org/10.1175/1520-0485(1989)019<0917:VMIBWO>2.0.CO;2

Stigebrandt A., Lass H. U., Liljebladh B., Alenius P., Piechura J., Hietala R., Beszczyńska A., 2002, DIAMIX – an experimental study of diapycnal deepwater mixing in the virtually tideless Baltic Sea, Boreal Environ. Res., 7 (4), 363–369.

Svensson A., 2005, Observations of baroclinic eddies in the Baltic Sea, Tech. Rep. B472, Dept. Oceanogr., Univ. Gothenburg.

Tanaka Y., Hibiya T., Niwa Y., 2007, Estimates of tidal dissipation and diapycnal diffusivity in the Kuril Straits using TOPEX/POSEIDON altimeter data, J. Geophys. Res., 112 (C10021), http://dx.doi.org/10.1029/2007JC004172

Tanaka Y., Hibiya T., Niwa Y., 2007, Estimates of tidal energy dissipation and diapycnal diffusivity in the Kuril Straits using topex/poseidon altimeter data, J. Geophys. Res., 112 (C10), 1–9.

Umgiesser G., 1997, Modelling the Venice Lagoon, It. J. Salt Lake Res., 6(2), 175–199.

Verboom G. K., de Ronde J. G., van Dijk R. P., 1992, A fine grid tidal flow and storm surge model of the North Sea, Cont. Shelf Res., 12 (2–3), 213–233.

Weis P., Thomas M., Sundermann J., 2008, Broad frequency tidal dynamics simulated by a high resolution global ocean tide model forced by ephemerides, J. Geophys. Res., 113 (C10029), http://dx.doi.org/10.1029/2007JC004556

Williamson J., 1980, Low-storage Runge-Kutta schemes, J. Comput. Phys., 35(1), 48–56. http://dx.doi.org/10.1016/0021-9991(80)90033-9

Benac C., Rubinic J., Ozanic N., 2003, The origin and evolution of coastal and submarine springs in Bakar Acta Carsologica, 32 (1), 157–171.

Biondic B., Sarin A., Fritz F., 1996, Hydrogeological map of the Adriatic catchment, Inst.Geol.Res., Zagreb.

Bonacci O., Roje-Bonacci T., 2000, Interpretation of groundwater level monitoring results in karst aquifers: examples from the Dinaric, Hydrol.Processes, 14 (14), 2423–2438. http://dx.doi.org/10.1002/1099-1085(20001015)14:14<2423::AID-HYP104>3.0.CO;2-2

Buric Z., Caput K., Vilicic D., 2004, Distribution of the diatom Cocconeis scutellum in the karstic estuary (Zrmanja, eastern Adriatic Biologia, 59 (1), 1–8.

Buric Z., Cetinic I., Vilicic D., Caput Mihalic K., Caric M., Olujic G., 2007a, Spatial and temporal distribution of phytoplankton in a highly stratified estuary (Zrmanja, Adriatic Sea), Mar. Ecol., 28 (Suppl.1), 169–177, http://dx.doi.org/10.1111/j.1439-0485.2007.00180.x

Buric Z., Kiss K. T.,´ Acs E., Vilicic D., Caput Mihalic K., Caric M., 2007b, The occurrence and ecology of the centric diatom Cyclotella choctawhatcheeana Prasad in a Croatian Nova Hedwiga, 84 (1–2), 135–153.

Buric Z., Vilicic D., Caput Mihalic K., Caric M., Kralj K., Ljubsic N., 2008, Pseudo-nitzschia blooms in the Zrmanja River Estuary (eastern Adriatic Diatom Res., 23 (1), 51–63.

Cortelezzi A., Capitulo A.R., Boccardi L., Arocena R., 2007, Benthic assemblages of a temperate estuarine system in South America: transition from a freshwater to an estuarine, J. Marine Syst., 68 (3–4), 569-580, http://dx.doi.org/10.1175/1520-0493(1981)109<0018:APEAEC>2.0.CO;2

Dorman C.E., Carniel S., Cavaleri L., Sclavo M., Chiggiato J., Doyle J., Haack T., Pullen J., Grbec B., Vilibic I., Janekovic I., Lee C., Malacic V., Orlić M., Paschini E., Russo A., Signell R.P., 2006, February 2003 marine atmospheric conditions and the bora over the northern, J. Geophys. Res., 111 (C03S03), http://dx.doi.org/10.1029/2005JC003134

Gacic M., Poulain P.-M., Zore-Armanda M., Barale V., 2001, Overview, [in:] Physical oceanography of the Adriatic, B. Cushman-Roisin, M. Gacic, P.-M.Poulain & A. Artegiani (ed.), Kluwer, Dordrecht, 1–44.

Hasle G.R., 1978a,Some specific preparations, [in:] Phytoplankton, A. Sournia (ed.), UNESCO, Paris, 136–142.

Hasle G.R., 1978b, Using the inverted, [in:] Phytoplankton A. Sournia (ed.), UNESCO, Paris, 191–196.

Ivancic I., Degobbi D., 1984, An optimal manual procedure for ammonia analysis in natural waters by the indophenol blue Water Res., 18 (9),1143–1147, http://dx.doi.org/10.1016/0043-1354(84)90230-6

Jay D. A., Orton P. M., Chiholm T., Wilon D. J., Fain A. M. V., 2007, Particle trapping in stratified estuaries: consequences of mass Estuar. Coast., 30 (6), 1095–1105.

Knox G. A., 1986, Estuarine ecosystems: a systems CRC Press, Boca Raton, 289 pp.

Kroeger K. D., Charette M. A., 2008, Nitrogen biogeochemistry of submarine groundwater Limnol.Oceanogr., 53 (3), 1025–1039, http://dx.doi.org/10.4319/lo.2008.53.3.1025

Lee C. M., Jones B. H., Arnone R., Clive D., Gobat J., Marini M., Orlić M., Pasaric Z., Peters H., Poulain P., Thaler D., Vilicic D., 2004, Shallow water fronts, river plumes and response to strong forcing – preliminary results from intensive surveys of the northern Adriatic, 37 Rapp. Congr. CIESM, p. 116.

Makjanic B., 1976, A short account of the climate of the town of Senj, [in:] Local wind bora, M. M. Yoshino (ed.), Univ. Tokyo Press, Tokyo, 145–152.

McLusky D.S., Elliott M., 2004, The estuarine ecosystem. Ecology, threats, and management, Oxford Univ. Press, Oxford, 214 pp.

Neill M., 2005, A method to determine which nutrient is limiting for plant growth in estuarine waters – at any salinity, Mar. Pollut. Bull., 50 (9), 945–955, http://dx.doi.org/10.1016/j.marpolbul.2005.04.002

Orlic M., Leder N., Pasaric M., Smircic A., 2000, Physical properties and currents recorded during September and October 1998 in the Velebit Channel (east Adriatic), Period. Biol., 102 (Suppl.1), 31–37.

Paoli A., Celussi M., Valeri A., Larato C., Bussani A., Umani S. F., Vadrucci M. R., Mazziotti C., Del Negro P., 2007, Picocyanobacteria in Adriatic transitional Estuar.Coast.Shelf Sci., 75 (1–2), 13–20, http://dx.doi.org/10.1175/1520-0493(1981)109<0018:APEAEC>2.0.CO;2

Peebles E. B., Burghart S. E., Hollander D. J., 2007, Causes of interestuarine variability in bay anchovy (Anchoa mitchilli) salinity at capture, Estuar. Coast., 30 (6), 1060–1074.

Penzar B., Penzar I., Orlic M., 2001, Weather and climate of the Croatian Feletar, Zagreb, 258 pp.,(in Croatian).

Raicich F., 1996, On the fresh water balance of the Adriatic, J. Marine Syst., 9 (3–4), 305–319.

Reaugh M. L., Roman M. R., Stoecker D. K., 2007, Changes in plankton community structure and function in response to variable freshwater flow in two tributaries of the Chesapeake Estuar. Coast., 30 (3), 403–417.

Redfield A. C., Ketchum B. H., Richard F. A., 1963, The influence of organisms on the composition of [in:] The Sea, M. N. Hill (ed.), Wiley, New York, 26–77.

Strickland J. D. H., Parson T. R., 1972, A practical handbook of seawater Bull. Fish. Res. Board Can., 167, 1–310.

Svensen C., Vilicic D., Wassmann P., Arashkevich E., Ratkova T., 2007, Plank-ton distribution and vertical flux of biogenic matter during high summer stratification in the Krka estuary (Eastern Estuar. Coast. Shelf Sci., 71 (3–4),381–390.

Tomazic I., 2006, Validation of remotely sensed Adriatic Sea surface M. Sc. thesis, Univ. Zagreb, Zagreb, 170 pp., (in Croatian).

Utermohl H., 1958, Zur Vervollkommnung der quantitativen Phytoplankton Mitt. Int. Verein. Theor. Angew. Limnol., 9, 1–38.

Venrick E. L., 1978, How many cells to [in:] Phytoplankton A.Sournia (ed.), UNESCO, Paris, 167–180.

Vilicic D., Orlic M., Jasprica N., 2008a, The deep chlorophyll maximum in the coastal north eastern Adriatic Sea, July 2007, Acta Bot. Croat., 67 (1), 33–43.

Vilicic D.,Terzic S., Ahel M., Buric Z., Jasprica N., Caric M., Caput-Mihalic K., Olujic G., 2008b, Phytoplankton abundance and pigment biomarkers in the oligotrophic, eastern Adriatic Environ. Monit. Assess., 142 (1–3), 199–218.

Vollenweider R. A., Giovanardi F., Montanari G., Rinaldi A., 1998, Characteriza-tion of the trophic conditions of marine coastal waters with special reference to the NW Adriatic Sea: proposal for a trophic scale, turbidity and generalized water quality Environmentrics, 9 (3), 329–357.

Gioia R., Sweetman A. J., Jones K.C., 2007, Coupling passive air sampling with emission estimates and chemical fate modeling for Persistent Organic Pollutants (POPs): a feasibility study for Northern Europe, Environ. Sci. Technol., 41 (7), 2165–2171, http://dx.doi.org/10.1021/es0626739

HELCOM, 2007, Towards a Baltic Sea unaffected by hazardous substances, HELCOM Ministeria Meeting, 15 November 2007, Kraków, Poland, 48 pp., www.helcom.fi/stc/files/Krakow2007/HazardousSubstances MM2007.pdf.

Jaward F. M., Farrar N. J., Harner T., Prevedouros C., Sweetman A. J., Jones K. C., 2003, Atmospheric PBDEs and PCNs across Europe: results of a passive sampling programme, Organohal.Comp., 61, 422–425, http://dx.doi.org/10.1021/es034705n

Jaward F. M., Farrar N. J., Harner T., Sweetman A. J., Jones K. C., 2004, Passive air sampling of PCBs, BDEs,and organochlorine pesticides across Europe, Environ. Sci. Technol., 38 (1), 34–41.

Kiviranta H., Ovaskainen M.-L., Vartiainen T., 2004, Market asket study on dietary intake of PCDD/Fs, PCBs, and BDEs in Finland, Environ. Int., 30 (7), 923–932.

Koistinen J., Kiviranta H., Ruokojarvi P., Parmanne R., Verta M., Hallikainen A., Vartiainen T., 2008, Organohalogen pollutants in herring from the northern Baltic Sea: concentrations,congener profiles and explanatory factors, Environ. Pollut., 154(2), 172–183.

Kumar K. S., Priya M., Sajwan K. S., Koli R., Roots O., 2009, Residues of persistent organic pollutants in Estonian soils (1964–2006), Est. J. Earth Sci., 58 (2),109–123, http://dx.doi.org/10.3176/earth.2009.2.02

Parmanne R., Hallikainen A., Isosaari P., Kiviranta H., Koistinen J., Laine O., Rantakokko P., Vuorinen P. J., Vartiainen T., 2006, The dependence of organohalogen compound concentrations on herring age and size in the Bothnian Sea, northern Baltic, Mar. Pollut. Bull., 52 (2), 149–161.

Roots O., Kiviranta H., Rantakokko P., 2007, BDE levels in Estonian foodstuffs, Organohal. Comp., 69, 2339–2341.

Roots O., Sweetman A., 2007, Passive air sampling of persistent organic pollutants in two Estonian air monitoring stations, Oil Shale, 24 (3), 483–494.

Roots O., Zitko V., Kiviranta H., Rantakokko P., 2008, Profiles of Polybrominated diphenyl ethers in aquatic biota, Arch. Ind. Hygiene Toxicol., 59 (3), 153–159, http://dx.doi.org/10.2478/10004-1254-59-2008-1875

Roots O., Zitko V., Kiviranta H., Rantakokko P., Ruokojarvi P., 2009, Polybrominated diphenyl ethers (PBDEs)in Baltic herring from Estonian waters, 2006–2008, J. Ecol. Chem., (submitted).

Aisen P., Listkowsky L., 1980, Iron transport and storage protein, Annu. Rev. Biochem., 49, 357–393, http://dx.doi.org/10.1146/annurev.bi.49.070180.002041

Bauchspieß K. R., St. Pierre T. G., Webb J., 1995, The effect of temperature of the radial distribution function of iron in ative horse spleen ferritin, Physica B, 208/209, 545–546. http://dx.doi.org/10.1016/0921-4526(94)00875-V


Briat J. F., Lobreaux S., 1997, Iron transport and storage in plants, Trends Plant Sci., 2(5), 187–193, http://dx.doi.org/10.1016/S1360-1385(97)85225-9


Chasteen N. D., 1998, Ferritin. Uptake, storage,and release of iron, [in:] Metal ions in biological systems, A. Siegel & H. Siegel (eds.), Vol. 35, Marcel Dekker,Inc., New York, 479–514.

Chasteen N. D., Harrison P. M., 1999, Mineralization in ferriti :an efficient means of iron storage, J. Struct. Biol., 126 (3), 182–194, http://dx.doi.org/10.1006/jsbi.1999.4118


Choi J. K., Jo P. G., Choi C. Y., 2008, Cadmium affects the expression of heat shock protein 90 and metallothionein mRNA in the Paciffc oyster, Crassostrea gigas, Comp. Biochem. Phys., 147 (3), 286–292.

Fobis-Loisy I., Aussel L., Briat J.-F., 1996, Post-tra scriptional regulation of plant ferriti accumulation in response to iron as observed in the maize mutant ys1, FEBS Lett., 397 (2–3), 149–154, http://dx.doi.org/10.1016/S0014-5793(96)01167-2

Frolow F., Kalb A. J., Yariv J., 1994, Structure of a unique twofold symmetric haem-binding site, Nat.Struct.Biol., 1, 45–460, http://dx.doi.org/10.1038/nsb0794-453

Geetha C., Deshpande V., 1999, Purification and characterization of fish liver ferritins, Comp. Biochem. Phys. B, 123 (3), 285–294.

Geret F., Cosson R. P., 2002, Induction of specific isoforms of metallothionein in mussel tissues after exposure to cadmium or mercury, Arch. Environ. Con. Tox.,42 (1),36–42, http://dx.doi.org/10.1007/s002440010289 <

Huang H.-Q., Xiao Z.-Q., Chen X., Lin Q.-M., Cai Z.-W., Chen P., 2004, Characteristics of structure, composition, mass spectra, and iron release from the ferriti of shark liver (Sphyr a zygaena), Biophys. Chem., 111 (3), 213–222.

Kakuta K., Orino K., Yamamoto S., Watanabe K., 1997, High levels of ferriti and iron in fetal bovine serum – comparison by five methods, Comp.Biochem. Phys. A, 118 (1),165–169, http://dx.doi.org/10.1016/S0300-9629(96)00403-3

Kong B., Huang H.-Q., Lin Q.-M., Kim W.-S., Cai Z., Cao T.-M., Miao H., Luo D.-M., 2003, Purification, electrophoretic behavior, and kinetics of iron release of liver ferriti of Dasyatis akajei, J. Protein Chem., 22 (1),61–70.

Korcz A., Twardowski T., 1989, Mechanizmy regulacji biosyntezy białka a przykładzie ferrytyny, Post. Biol. Komorki, 16 (2), 177–196.

Korcz A., Twardowski T., 1992a, Lupin ferritin: purification and characterization, biosynthesis and regulation of in vitro synthesis in plants, J. Plant Physiol., 141 (1), 75–81.

Korcz A., Twardowski T., 1992b, The effect of selected heavy metal ions on the in vitro translation system of wheat germ – protective function of plant ferritin, Acta Physiol. Plant., 14 (4), 185–190.

Kumar T. R., Prasad M. N. V., 1999, Metal binding properties of ferritin in Vigna mungo (L.) Hepper (Black Gram): Possible role in heavy metal detoxification, Bull. Environ. Contam. Tox., 62 (4), 502–507.

Lewin A., Moore G. R., Le Brun N. E., 2005, Formation of protein-coated iron minerals, Dalton Trans., 22, 3597–3610, http://dx.doi.org/10.1039/b506071k

Liu X., Theil E. C., 2005, Ferritins: dynamic management of biological iron and oxygen chemistry, Accounts Chem. Res., 38 (3), 167–175.

Lowry O. H., Rosebrough N. J., Farr A. L., Randall R. J., 1951, Protein measurement with Folin phenol reagent, J. Biol. Chem., 193 (1), 265–275.

Nair P. S., Robinson W. E., 2000, Cadmium speciation and transport in the blood of the bivalve Mytilus edulis, Mar. Environ. Res., 50 (1–5), 99–102.

Penfold C. N., Ringeling P. L., Davy S. L., Moore G. R., McEwan A. G., Spiro S., 1996, Isolation,characterisation and expression of the bacterioferriti gene of Rhodobacter capsulatus, FEMS Microbiol. Lett., 139 (2–3), 143–148.

Price D. J., Joshi J. G., 1982, Ferriti: a zinc detoxicant and a zinc ion donor, Proc. Natl. Acad. Sci.(USA), 79, 3116–3119, http://dx.doi.org/10.1073/pnas.79.10.3116

Price D. J., Joshi J. G., 1983, Ferriti: binding of beryllium and other divalent metal ions, J. Biol. Chem., 258 (18), 10873–10880.

Ragland M., Theil E., 1993, Ferriti (mRNA,protein) and iron concentrations during soybea odule development, Plant Mol. Biol., 21 (3),555–560, http://dx.doi.org/10.1007/BF00028813

Rahman I. H. A., Chua-anusorn W., Webb J., Macey D. J., St.Pierre T. G., 1999, Characterization of dugong liver ferritin, Anal. Chim. Acta, 393 (1–3), 235–243.

Sczekan S. R., Joshi J. G., 1989, Metal-binding properties of phytoferriti and sy thetic ion cores, Biochim. Biophys. Acta, 990 (1),8–14.

Suryakala S., Deshpande V., 1999, Purification and characterization of liver ferritins from different animal species, Vet. Res. Commun., 23 (3), 165–181.

Theil E. C., 1987, Ferritin: structure, gene regulation, and cellular function in animals, plants, and microorganisms, Annu. Rev. Biochem., 56,289–319, http://dx.doi.org/10.1007/s10534-006-9063-6

Theil E. C., 1998, The iron responsive element (IRE)family of mRNA regulators. Regulation of iron transport and uptake compared in animals, plants, and microorganisms, Met. Ions Biol. Syst., 35, A. Siegel & H. Siegel (eds.), Marcel Dekker, Inc., New York, 403–434.

Theil E. C., 2007, Coordinating responses to iron and oxygen stress with DNA and mRNA promoters: the ferriti story, Biometals, 20 (3–4), 513–521.

Theil E.., Sayers D., 1989, Iron core formatio in ferritin, Basic Life Sci., 51, 161–167.

Theil E. C., Takagi H., Small G. W., He L., Tipton A. R., Danger D., 2000, The ferritin iron entry and exit problem, Inorg. Chim. Acta, 297 (1), 242–251.

Tosha T.,Hasan M.R.,Theil E..,2008,The ferriti Fe2 site at the diiro catalytic center controls the reaction with O₂ in the rapid mineralization pathway, PNAS, 105 (47), 18182–18187, http://dx.doi.org/10.1073/pnas.0805083105

Treffry A., Zhao Z., Quail M. A., Guest J. R.,Harrison P. M., 1998, How the presence of three iron binding sites affects the iron storage function of the ferritin (EcFtnA) of Escherichia coli, FEBS Lett., 432 (3), 213–218.

Uchida T., 1995, Overview of iron metabolism, Int. J. Hematol., 62 (4), 19–202.

Ueno T., Abe M., Hirata K., Abe S., Suzuki M., Shimizu N., Yamamoto M., Takata M., Watanabe Y., 2009, Process of accumulation of metal ions on the i terior surface of apo-ferritin:crystal structures of a series of apo-ferritins containing variable quantities of Pd(II)ions, J. Am. Chem. Soc., 131 (14), 5094–5100, http://dx.doi.org/10.1021/ja806688s

Wardeska J. G., Viglione B., Chasteen N. D., 1986, Metal iron complexes of apoferritin. Evidence for initial binding in the hydrophilic channels, J. Biol. Chem., 261 (15), 667–6683.

Winzerling J. J., Nez P., Porath J., Law J. H., 1995, Rapid and efficient isolation of transferri and ferritin from Manduca sexta, Insect Biochem. Molec. Biol., 25 (2), 217–224. http://dx.doi.org/10.1016/0965-1748(94)00058-P

Worwood M., 1997, The laboratory assessment of iron status – an update, Clin. Chim. Acta, 259,3–23.

Zhang Y., Meng Q., Jiang T., Wang H., Xie L.,Zhang R., 2003, A ovel ferriti subunit involved in shell formation from the pearl oyster (Pinctada fucata), Comp. Biochem. Phys. B, 135 (1), 43–54.

ArcGIS 9, 2004, Getting started with ArcGIS, Esri Press, 272 pp. Barnston A. G., Livezey R. E., 1987, Classiffication,seasonality and persistence of low-frequency atmospheric circulation patterns, Mon. Weather Rev., 115 (6), 1083–1126, http://dx.doi.org/10.1175/1520-0493(1987)115<1083:CSAPOL>2.0.CO;2

Berglund J., Mattila J., Ronnberg O., Heikkila J., Bonsdorff E., 2003, Seasonal and inter-annual variation in occurrence and biomass of rooted macrophytes and drift algae in shallow bays, Estuar. Coast. Shelf Sci., 56 (5–6), 1167–1175., http://dx.doi.org/10.1016/S0272-7714(02)00326-8

Bonsdor C. E., Pearson T. H., 1999, Variation in the sublittoral macrozoobenthos of the Baltic Sea along environmental gradients:a functional group approach, Aust. J. Ecol., 24 (4), 312–326, http://dx.doi.org/10.1046/j.1442-9993.1999.00986.x

Clarke K. R., Gorley R. N., 2006, Primer v6:user manual/tutorial, Primer-E, Plymouth, UK, 192 pp.

Clarke K. R., Somerfield P. J., Chapman M. G., 2006, On resemblance measures for ecological studies,including taxonomic dissimilarities and a zero-adjusted Bray-Curtis coeffcient for denuded assemblages, J. Exp. Mar. Biol. Ecol., 330 (1), 55–80, http://dx.doi.org/10.1016/j.jembe.2005.12.017

Cloern J. E., 2001, Our evolving conceptual model of the coastal eutrophication problem, Mar.Ecol.-Prog. Ser., 210, 223–253, http://dx.doi.org/10.3354/meps210223

Conners M. E., Hollowed A. B., Brown E., 2002, Retrospective analysis of Bering Sea bottom trawl surveys:regime shift and ecosystem reorganization, Prog. Oceanogr., 55 (1), 209–222, http://dx.doi.org/10.1016/S0079-6611(02)00079-4

Edgar G. J., Barrett N. S., 2002, Benthic macrofauna in Tasmanian estuaries: scales of distribution and relationships with environmental variables, J. Exp. Mar. Biol. Ecol., 270 (1), 1–24, http://dx.doi.org/10.1016/S0022-0981(02)00014-X

Edgar G. J., Shaw C., Watson G. F., Hammond L. S., 1994, Comparison of species richness, size-structure and production of benthos in vegetated and unvegetated habitats in Western Port, Victoria, J. Exp. Mar. Biol. Ecol., 176(2), 201–226, http://dx.doi.org/10.1016/0022-0981(94)90185-6

Fonseca M. S., Kenworthy W. J., Colby D. R., Rittmaster K. A., Thayer G. W., 1990, Comparisons of fauna among natural and transplanted eelgrass Zostera marina meadows:criteria for mitigation, Mar. Ecol.-Prog. Ser., 65, 251–264, http://dx.doi.org/10.3354/meps065251

Frechette M., Butman C. A., Geyer W. R., 1989, The importance of boundary-layer flows in supplying phytoplankton to the benthic suspension feeder, Mytilus edulis L., Limnol. Oceanogr., 34 (1), 19–36, http://dx.doi.org/10.4319/lo.1989.34.1.0019

Grall J., Le Loch F., Guyonnet B., Riera P., 2006, Community structure and food web based on stable isotopes (δ¹⁵ N and δ¹³C)analysis of a North Eastern Atlantic maerl bed, J. Exp. Mar. Biol. Ecol., 338 (1), 1–15, http://dx.doi.org/10.1016/j.jembe.2006.06.013

Gray J. S., Wu R. S.-S., Ying Y. O., 2002, Effects of hypoxia and organic enrichment on the coastal marine environment, Mar. Ecol.-Prog. Ser., 238, 249–279, http://dx.doi.org/10.3354/meps238249

Hanninen J., Vuorinen I., Hjelt P., 2000, Climatic factors in the Atlantic control the oceanographic and ecological changes in the Baltic Sea, Limnol. Oceanogr., 45 (3), 703–710, http://dx.doi.org/10.4319/lo.2000.45.3.0703

Heine J. N., 1989, Effects of ice scour on the structure of sublittoral marine algal assemblages of St. Lawrence and St. Matthew islands, Alaska, Mar. Ecol.-Prog. Ser., 52, 253–260, http://dx.doi.org/10.3354/meps052253

Herkul K., Kotta J., Kotta I., Orav-Kotta H., 2006, Effects of physical disturbance, isolation and key macrozoobenthic species on community development, recolonisation and sedimentation processes, Oceanologia, 48 (S), 267–282.

Howarth R. W., Swaney D. P., Butler T. J., Marino R., 2000,Climatic control on eutrophication of the Hudson River Estuary, Ecosystems, 3, 210–215, http://dx.doi.org/10.1007/s100210000020

Isaus M., 2004, Factors structuring Fucus communities at open and complex coastlines in the Baltic Sea, Ph. D. thesis, Dept. Botany, Stockholm Univ., Stockholm, p. 40.

Jaagus J., 2006, Trends in sea ice conditions in the Baltic Sea near the Estonian coast during the period 1949/1950–2003/2004 and their relationships to largescale atmospheric circulation, Boreal Environ. Res., 11 (3), 169–183.

Jackson J. B. C., Kirby M. X., Berger W. H., Bjorndal K. A., Botsord L. W., Bourque B. J., Bradbury R. H., Cooke R., Erlandson J., Estes J. A., Hughes T. P., Kidwell S., Lange C. B., Lenihan H. S., Pandol J. M., Peterson C. H., Steneck R. S., Tegner M. J., Warner R. R., 2001, Historical overfishing and the recent collapse of coastal ecosystems, Science, 293 (5530), 629–637, http://dx.doi.org/10.1126/science.1059199

Janke K., 2006, Biological interactions and their role in community structure in the rocky intertidal of Helgoland (German Bight, North Sea), Helgol. Mar. Res., 44 (2), 219–263.

Jernelov A. ,Rosenberg R., 1976, Stress tolerance of ecosystems, Environ.Conserv., 3 (01), 43–46, http://dx.doi.org/10.1017/S0376892900017732

Justic D., Rabalais N. N., Turner R. E., 2005, Coupling between climate variability and coastal eutrophication: Evidence and outlook for the northern Gulf of Mexico, J. Sea Res., 54 (1), 25–35, http://dx.doi.org/10.1016/j.seares.2005.02.008

Karlson K., Rosenberg R., Bonsdorff E., 2002, Temporal and spatial largescale effects of eutrophication and oxygen deficiency on benthic fauna in Scandinavian and Baltic waters – a review, Oceanogr. Mar. Biol. Ann. Rev., 40, 427–489.

Kasim M., Mukai H., 2006, Contribution of benthic and epiphytic diatoms to clam and oyster production in the Akkeshi-ko Estuary, J. Oceanogr., 62 (3), 267–281, http://dx.doi.org/10.1007/s10872-006-0051-9

Kotta J., Kotta I., Simm M., Lankov A., Lauringson V., Pollumae A., Ojaveer H., 2006a, Ecological consequences of biological invasions: three invertebrate case studies in the north-eastern Baltic Sea, Helgol. Mar. Res., 60 (2), 106–112.

Kotta J., Kotta I., Simm M., Pollupuu M., 2009, Separate and interactive effects of eutrophication and climate variables on the ecosystem elements of the Gulf of Riga, Estuar. Coast. Shel Sci., 84 (4), 509–518, http://dx.doi.org/10.1016/j.ecss.2009.07.014

Kotta J., Lauringson V., Kotta I., 2007, Response of zoobenthic communities to changing eutrophication in the northern Baltic Sea, Hydrobiologia, 580 (1), 97–108.

Kotta J., Lauringson V., Martin G., Simm M., Kotta I., Herkul K., Ojaveer H., 2008a, Gulf of Riga and arnu Bay, [in:] Ecology of Baltic coastal waters, U. Schiewer (ed.), Ecol. Stud., 197, Springer, Dordrecht, 217–243.

Kotta J., Mohlenberg F., 2002, Grazing impact of Mytilus edulis and Dreissena polymorpha (allas) in the Gulf of Riga, Baltic Sea estimated from biodeposition rates of algal pigments, Ann.Zool.Fenn., 39 (2), 15–160.

Kotta J., Olafsson E., 2003, Competition for food between the introduced exotic polychaete Marenzelleria viridis and the resident native amphipod Monoporeia affnis in the Baltic Sea, J. Sea Res., 50 (1), 27–35, http://dx.doi.org/10.1016/S1385-1101(03)00041-8

Kotta J., Orav H., 2001, Role of benthic macroalgae in regulating macrozoobenthic assemblages in the Vainameri (north-eastern Baltic Sea), Ann. Zool. Fenn., 38 (2), 163–171.

Kotta J., Orav-Kotta H., Paalme T., Kotta I., Kukk H., 2006b, Seasonal changes in situ grazing of the mesoherbivores Idotea baltica and Gammarus oceanicus on the brown algae Fucus vesiculosus and ilayella littoralis in the central Gulf of Finland,Baltic Sea, Hydrobiologia,554 (1), 117–125.

Kotta J., Orav-Kotta H., Vuorinen I., 2005, Field measurements on the variability in biodeposition and grazing pressure of suspension feeding bivalves in the northern Baltic Sea, [in:]The comparative roles of suspension feeders in ecosystems, R. Dame & S. Olenin (eds.), Springer, Dordrecht, 11–29.

Kotta J., Paalme T., Kersen P., Martin G., Herkul K., Moller T., 2008b, Density dependent growth of the red algae Furcellaria lumbricalis and Coccotylus truncatus in the West-Estonian Archipelago Sea, northern Baltic Sea, Oceanologia, 50 (4), 577–585.

Kotta J., Paalme T., Martin G.,Makinen A., 2000, Major changes in macroalgae community composition affect the food and habitat preference of Idotea baltica, Int. Rev. Hydrobiol., 85 (5–6), 693–701, http://dx.doi.org/10.1002/1522-2632(200011)85:5/6<697::AID-IROH697>3.0.CO;2-0

Kotta J., Paalme T., Puss T., Herkul K., Kotta I., 2008c, Contribution of scaledependent environmental variability on the biomass patterns of drift algae and associated invertebrates in the Gulf of Riga, northern Baltic Sea, J. Marine Syst., 74 (Supp.1), 116–123, http://dx.doi.org/10.1016/j.jmarsys.2008.03.030

Kotta J., Simm M., Kotta I., Kanosina I., Kallaste K., Raid T., 2004a, Factors controlling long-term changes of the eutrophicated ecosystem of Parnu Bay, Gulf of Riga, Hydrobiologia, 514 (1–3), 259–268, http://dx.doi.org/10.1023/B:hydr.0000018224.56324.44

Kotta J., Torn K., Martin G., Orav-Kotta H., Paalme T., 2004b, Seasonal variation of invertebrate grazing on Chara connivens and C. tomentosa in Koiguste Bay, NE Baltic Sea, Helgol. Mar. Res., 58 (2), 71–76, http://dx.doi.org/10.1007/s10152-003-0170-2

Kotta J., Witman J., 2009, Diversity patterns and their causes.Regional scale, [in:] Hard bottom communities: patterns, scales, dynamics, functions, shifts, M. Wahl (ed.), Ecol.Stud., Springer, Dordrecht, (in press).

Lauringson V., Kotta J., 2006, Influence of the thin drift algal mats on the distribution of macrozoobenthos in Koiguste Bay, NE Baltic Sea, Hydrobiologia, 554 (1), 97–105, http://dx.doi.org/10.1007/s10750-005-1009-4

Lauringson V., Kotta J., Orav-Kotta H., Kotta I., Herkul K., Pollumae A., 2009, Comparison of benthic and pelagic suspension feeding in shallow water habitats of the northeastern Baltic Sea, Mar.Ecol.,30 (1), 43–55, http://dx.doi.org/10.1111/j.1439-0485.2009.00302.x

Lauringson V., Malton E., Kotta J., Kangur K., Orav-Kotta H., Kotta I., 2007, Environmental factors influencing the biodeposition of the suspension feeding bivalve Dreissena polymorpha (allas): comparison of brackish and fresh water populations in the Northern Baltic Sea and Lake Peipsi, Estuar. Coast. Shelf Sci., 75 (4), 459–467, http://dx.doi.org/10.1016/j.ecss.2007.05.037

Lawrence J. M., 1975, On the relationship between marine plants and sea urchins, Oceanogr. Mar. Biol. Ann. Rev., 13, 213–286.

Levinton J. S., Stewart S., 1988, Effects of sediment organics, detrital input, and temperature on demography, production,and body size of a deposit feeder, Mar. Ecol.-Prog. Ser., 49, 259–266, http://dx.doi.org/10.3354/meps049259

Madsen J. D., Chambers P. A., James W. F., Koch E. W., Westlake D. F., 2001, The interaction between water movement, sediment dynamics and submersed macrophytes, Hydrobiologia, 444 (1–3), 71–84, http://dx.doi.org/10.1023/A:1017520800568

McGowan J. A., Cayan D. R., Dorman L. M., 1998, Climate-ocean variability and ecosystem response in the northeast Pacific, Science, 281 (5374), 210–217, http://dx.doi.org/10.1126/science.281.5374.210

Olafsson E., Elmgren R., 1997, Seasonal dynamics of sublittoral meiobenthos in relation to phytoplankton sedimentation in the Baltic Sea, Estuar. Coast. Shelf Sci., 45 (2), 149–164, http://dx.doi.org/10.1006/ecss.1996.0195

Olli K., Clarke A., Danielsson A., Aigars J., Conley D. J., Tamminen T., 2008, Diatom stratigraphy and long-term dissolved silica concentrations in the Baltic Sea, J. Marine Syst., 73 (3–4), 284–299 http://dx.doi.org/10.1016/j.jmarsys.2007.04.009

Orav-Kotta H.,Kotta J., 2004, Food and habitat choice of the isopod Idotea baltica in the northeastern Baltic Sea, Hydrobiologia, 514 (1–3), 79–85, http://dx.doi.org/10.1023/B:hydr.0000018208.72394.09

Orav-Kotta H., Kotta J., Herkul K., Kotta I., Paalme T., 2009, Seasonal variability in the grazing potential of the invasive amphipod Gammarus tigrinus and the native amphipod Gammarus salinus in the northern Baltic Sea, Biol. Invasions, 11 (3), 597–608, http://dx.doi.org/10.1007/s10530-008-9274-6

Ottersen G., Planque B., Belgrano A., Post E., Reid P. C., Stenseth N. C., 2001, Ecological effects of the North Atlantic Oscillation, Oecologia, 128 (1), 1–14, http://dx.doi.org/10.1007/s004420100655

Paalme T., Kukk H., Kotta J., Orav H., 2002, 'In vitro' and 'in situ' decomposition of nuisance macroalgae Cladophora glomerata and ilayella littoralis, Hydrobiologia, 475/476, 469–476, http://dx.doi.org/10.1023/A:1020364114603

Babin M., Morel A., Claustre H., Bricaud A., Kolber Z., Falkowski P. G., 1996, N trogen-and irradiance-dependent var ations of the maximum quantum yield of carbonifixation in eutrophic, mesotrophic and oligotrophic marine systems, Deep-Sea Res. Pt. I, 43 (8), 1241–1272.

Bidigare R., 1995, tt007 pigments, U.S. JGOFS Data System, http://usjgofs.whoi.edu/jg/serv/jgofs/eqpac/t 007/pigments.html0.

Bidigare R., 2002a, tt008 pigments, U.S. JGOFS Data System, http://usjgofs.whoi.edu/jg/serv/jgofs/eqpac/t 008/pigments.html0.

Bidigare R., 2002b, tt011 pigments, U.S. JGOFS Data System, http://usjgofs.whoi.edu/jg/serv/jgofs/eqpac/t 011/pigments.html0.

Bidigare R., 2002c, tt012pigments, U.S. JGOFS Data System, http://usjgofs.whoi.edu/jg/serv/jgofs/eqpac/t 012/pigments.html0.

Bricaud A., Babin M., Morel A., Claustre H., 1995, Variability in the chlorophyll-specific absorption coefficients of natural phytoplankton: Analysis and parameterisation, J. Geophys. Res., 100 (C7), 13 321–13 332.

Brune C., Brylinski J. M., Lemoine Y., 1993, In situ variations of the xanthophylls diadinoxanthin and diatoxanthin: photoadaptation and relat onships with a hydrodynamical system of the eastern Engl sh Channel, Mar.Ecol.-Prog. Ser., 102,69–77.

Brune C., Casotti R.,Aronne B., Vantrepotte V.,2003, Measured photophys ological parameters used as tools to estimate vert cal water movements in the coastal Mediterranean, J. Plankton Res., 25 (11), 1413–1425.

Brune C., Casotti R., Vantreporte V., Corato F., Conversano F., 2006, Picophytoplankton diversity and photoacclimat on in the Strait of Sicily (Mediterranean Sea) in summer. I. Mesoscale variations, Aqua. Microb. Ecol., 44 (2), 127–141.

Claustre H., Kerherv Le P., Marty J.-C., Prieur L., 1994, Phytoplankton photoadaptation related to some frontal phys cal processes, J. Marine Sys., 5 (3–5), 251–265.

Goericke R., 2001a, rr-kiwi6 HPLC pigments, U. S. JGOFS Data System, http://usjgofs.whoi.edu/jg/serv/jgofs/sou hern/rr-kiwi 6/HPLC pigments.html0.

Goericke R., 2001b, rr-kiwi7 HPLC pigments, U. S. JGOFS Data System, http://usjgofs.whoi.edu/jg/serv/jgofs/sou hern/rr-kiwi 7/HPLC pigments.html0.

Goericke R., 2001c, rr-kiwi8 HPLC pigments, U. S. JGOFS Data System, http://usjgofs.whoi.edu/jg/serv/jgofs/sou hern/rr-kiwi 8/HPLC pigments.html0.

Goericke R., 2001d, rr-kiwi9 HPLC pigments, U. S. JGOFS Data System, http://usjgofs.whoi.edu/jg/serv/jgofs/sou hern/rr-kiwi 9/HPLC pigments.html0.

Jeffrey S. W., Mantoura R. F. C., Wrigh S. W., 1997, Phytoplankton pigments in oceanography: Guidelines to modern methods, UNESCO Publ., Paris, 661 pp.

Koblen z-Mishke O. I., 1971, Same ecological and physiological properties of phytoplankton, [in:] Functioning of pelagic plankton communities in the tropical regions of the ocean, M. E. Vinogradov (ed.), Nauka, Moskva, 80–87, (in Russian).

Majchrowski R., Ostrowska M., 1999, Modified relationships between the occurrence of photoprotect ng carotenoids of phytoplankton and Potentially Destructive Radiation in the sea, Oceanologia, 41 (4), 589–599.

Margalef R., 1967, Some concepts relative to the organ sat on of plankton, Oceanogr. Mar. Biol. Ann. Rev., 5, 257–289.

Morel A., Prieur L., 1977, Analysis of var ations in ocean color, Limnol.Oceanogr., 22 (4), 709–722, http://dx.doi.org/10.4319/lo.1977.22.4.0709

Oubelkheir K., Claustre H., Sciandra A., Babin M., 2005, Bio-optical and biogeochemical properties of different trophic regimes in oceanic waters, Limnol. Oceanogr., 50 (6), 1795–1809, http://dx.doi.org/10.4319/lo.2005.50.6.1795

Uitiz J., Huo Y., Bruyan F., Babin M., Claustre H., 2008, Relating phytoplankton photophysiological properties to community structure on large scales, Limnol. Oceanogr., 53 (2), 614–630, http://dx.doi.org/10.4319/lo.2008.53.2.0614

Uitiz J., Claustre H., Garcia N., Griffiths F. B., Ras J., Sandroni V., 2009, A phytoplankton class-speci .c pr mary product on model applied to the Kerguelen Islands region (Southern Ocean), Deep-Sea Res. Pt. I,56 (4), 541–560, http://dx.doi.org/10.1016/j.dsr.2008.11.006

Werdell P. J., Bailey S. W., 2002, The SeaW FS Bio-optical Archive and Storage System (SeaBASS): Current arch tecture and mplementat on ,NASA Tech. Memo. 2002–211617, G. S. Fargion & C. R. McClain (eds.), NASA Goddard Space Fligh Center, Greenbelt, MD, 45 pp.

WoĽniak B., Dera J., 2007, Light absorption in sea water, Atmos. Oceanogr. Sci. Libr., 33, Springer, New York, 454 pp.

WoĽniak B., Dera J., Ficek D., Majchrowski R., Ostrowska M., Kaczmarek S., 2003, Modelling light and photosynthesis in the marine environment, Oceanologia, 45 (2), 171–245.

WoĽniak B., Ostrowska M., 1990, Composition and resources of photosynthetic pigments of the sea phytoplankton, Oceanologia, 29, 91–115.

Wrigh S. W., Jeffrey S. W., 2006, Pigment markers for phytoplankton product on, [in:] Marine organic matter: Biomarkers, isotopes and DNA, J. K. Volkman (ed.), Springer-Verlag, Berlin, 71–104.